Simon Jupp
Simon Jupp
Geverifieerd e-mailadres voor ebi.ac.uk - Homepage
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A practical guide to building owl ontologies using protégé 4 and co-ode tools edition1. 2
M Horridge, S Jupp, G Moulton, A Rector, R Stevens, C Wroe
The university of Manchester 107, 2009
6952009
Expression Atlas update—an integrated database of gene and protein expression in humans, animals and plants
R Petryszak, M Keays, YA Tang, NA Fonseca, E Barrera, T Burdett, ...
Nucleic acids research 44 (D1), D746-D752, 2016
4372016
Expression Atlas update—a database of gene and transcript expression from microarray-and sequencing-based functional genomics experiments
R Petryszak, T Burdett, B Fiorelli, NA Fonseca, M Gonzalez-Porta, ...
Nucleic acids research 42 (D1), D926-D932, 2014
3022014
The EBI RDF platform: linked open data for the life sciences
S Jupp, J Malone, J Bolleman, M Brandizi, M Davies, L Garcia, A Gaulton, ...
Bioinformatics 30 (9), 1338-1339, 2014
2262014
Identifiers for the 21st century: How to design, provision, and reuse persistent identifiers to maximize utility and impact of life science data
JA McMurry, N Juty, N Blomberg, T Burdett, T Conlin, N Conte, M Courtot, ...
PLoS biology 15 (6), e2001414, 2017
692017
A new Ontology Lookup Service at EMBL-EBI.
S Jupp, T Burdett, C Leroy, HE Parkinson
SWAT4LS, 118-119, 2015
512015
Populous: a tool for building OWL ontologies from templates
S Jupp, M Horridge, L Iannone, J Klein, S Owen, J Schanstra, ...
BMC bioinformatics 13 (1), 1-12, 2012
512012
Developing a kidney and urinary pathway knowledge base
S Jupp, J Klein, J Schanstra, R Stevens
Journal of biomedical semantics 2 (2), 1-17, 2011
482011
Using ontologies and vocabularies for dynamic linking
S Bechhofer, Y Yesilada, R Stevens, S Jupp, B Horan
IEEE Internet Computing 12 (3), 32-39, 2008
372008
Expression Atlas update: from tissues to single cells
I Papatheodorou, P Moreno, J Manning, AMP Fuentes, N George, ...
Nucleic Acids Research 48 (D1), D77-D83, 2020
362020
The KUPKB: a novel Web application to access multiomics data on kidney disease
J Klein, S Jupp, P Moulos, M Fernandez, B Buffin‐Meyer, A Casemayou, ...
The FASEB Journal 26 (5), 2145-2153, 2012
362012
Ten simple rules for selecting a bio-ontology
J Malone, R Stevens, S Jupp, T Hancocks, H Parkinson, C Brooksbank
PLoS computational biology 12 (2), e1004743, 2016
352016
Linking rare and common disease: mapping clinical disease-phenotypes to ontologies in therapeutic target validation
S Sarntivijai, D Vasant, S Jupp, G Saunders, AP Bento, D Gonzalez, ...
Journal of biomedical semantics 7 (1), 1-11, 2016
342016
A flexible API and editor for SKOS
S Jupp, S Bechhofer, R Stevens
European Semantic Web Conference, 506-520, 2009
322009
Issues in learning an ontology from text
C Brewster, S Jupp, J Luciano, D Shotton, RD Stevens, Z Zhang
BMC bioinformatics 10 (S5), S1, 2009
322009
The cellular microscopy phenotype ontology
S Jupp, J Malone, T Burdett, JK Heriche, E Williams, J Ellenberg, ...
Journal of biomedical semantics 7 (1), 28, 2016
252016
Ordo: An ontology connecting rare disease, epidemiology and genetic data
D Vasant, L Chanas, J Malone, M Hanauer, A Olry, S Jupp, PN Robinson, ...
Proceedings of ISMB 30, 2014
222014
Logical gene ontology annotations (goal): exploring gene ontology annotations with owl
S Jupp, R Stevens, R Hoehndorf
Journal of biomedical semantics 3 (1), 1-16, 2012
222012
SKOS with OWL: Don't be Full-ish!
S Jupp, S Bechhofer, R Stevens
OWLED 432, 2009-2, 2008
222008
The Monarch Initiative in 2019: an integrative data and analytic platform connecting phenotypes to genotypes across species
KA Shefchek, NL Harris, M Gargano, N Matentzoglu, D Unni, M Brush, ...
Nucleic acids research 48 (D1), D704-D715, 2020
202020
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Artikelen 1–20