Geographical and temporal distribution of SARS-CoV-2 clades in the WHO European Region, January to June 2020 E Alm, EK Broberg, T Connor, EB Hodcroft, AB Komissarov, ... Eurosurveillance 25 (32), 2001410, 2020 | 74 | 2020 |
STAT2 signaling restricts viral dissemination but drives severe pneumonia in SARS-CoV-2 infected hamsters R Boudewijns, HJ Thibaut, SJF Kaptein, R Li, V Vergote, L Seldeslachts, ... Nature communications 11 (1), 1-10, 2020 | 63* | 2020 |
A phylodynamic workflow to rapidly gain insights into the dispersal history and dynamics of SARS-CoV-2 lineages S Dellicour, K Durkin, SL Hong, B Vanmechelen, J Martí-Carreras, MS Gill, ... Molecular Biology and Evolution 38 (4), 1608-1613, 2021 | 24* | 2021 |
Human cytomegalovirus genomics and transcriptomics through the lens of next-generation sequencing: revision and future challenges J Martí-Carreras, P Maes Virus genes 55 (2), 138-164, 2019 | 13 | 2019 |
Complete genome sequence of a new Ebola virus strain isolated during the 2017 Likati outbreak in the Democratic Republic of the Congo T Wawina-Bokalanga, B Vanmechelen, J Martí-Carreras, V Vergote, ... Microbiology resource announcements 8 (20), 2019 | 10 | 2019 |
NCBI’s virus discovery Hackathon: Engaging research communities to identify cloud infrastructure requirements R Connor, R Brister, JP Buchmann, W Deboutte, R Edwards, ... Genes 10 (9), 714, 2019 | 7 | 2019 |
Preparedness needs research: How fundamental science and international collaboration accelerated the response to COVID-19 CM Kinsella, PD Santos, I Postigo-Hidalgo, A Folgueiras-González, ... PLoS pathogens 16 (10), e1008902, 2020 | 4 | 2020 |
Accounting for population structure reveals ambiguity in the Zaire Ebolavirus reservoir dynamics B Vrancken, T Wawina-Bokalanga, B Vanmechelen, J Martí-Carreras, ... PLoS neglected tropical diseases 14 (3), e0008117, 2020 | 4 | 2020 |
Human Diversity of Killer Cell Immunoglobulin-Like Receptors and Human Leukocyte Antigen Class I Alleles and Ebola Virus Disease Outcomes T Wawina-Bokalanga, B Vanmechelen, V Lhermitte, J Martí-Carreras, ... Emerging infectious diseases 27 (1), 76, 2021 | 2 | 2021 |
BKTyper: free online tool for polyoma BK virus VP1 and NCCR typing J Martí-Carreras, O Mineeva-Sangwo, D Topalis, R Snoeck, G Andrei, ... Viruses 12 (8), 837, 2020 | 2 | 2020 |
VANIR—NextFlow Pipeline for Viral Variant Calling and de Novo Assembly of Nanopore and Illumina Reads for High-Quality dsDNA Viral Genomes J Martí-Carreras, P Maes Multidisciplinary Digital Publishing Institute Proceedings 50 (1), 117, 2020 | 1 | 2020 |
Biogeography profiling and expression pattern of the merA and merB genes retrieved from global deep ocean metagenomes and metatranscriptomes J Martí Carreras Universitat Pompeu Fabra, 2017 | 1 | 2017 |
Bat echolocation plasticity in allopatry: a call for caution in acoustic identification of Pipistrellus sp. C Montauban, M Mas, C Tuneu-Corral, OS Wangensteen, I Budinski, ... Behavioral Ecology and Sociobiology 75 (4), 1-15, 2021 | | 2021 |
Exploration of the Ixodes ricinus virosphere unveils an extensive virus diversity including novel Coltiviruses and other reoviruses B Vanmechelen, M Merino, V Vergote, L Laenen, M Thijssen, ... bioRxiv, 2021 | | 2021 |
NCBI’s Virus Discovery Codeathon: Building “FIVE”—The Federated Index of Viral Experiments API Index J Martí-Carreras, AR Gener, SD Miller, AF Brito, CE Camacho, R Connor, ... Viruses 12 (12), 1424, 2020 | | 2020 |
Second capture of Promops centralis (Chiroptera) in French Guiana after 28 years of mist-netting and description of its echolocation and distress calls JSP Froidevaux, C Roemer, C Lemarchand, J Marti-Carreras, P Maes, ... Acta Amazonica 50 (4), 327-334, 2020 | | 2020 |
Drosophila Interspecific Hybridization Causes a Deregulation of the piRNA Pathway Genes V Gámez-Visairas, V Romero-Soriano, J Martí-Carreras, ... Genes 11 (2), 215, 2020 | | 2020 |
Biogeography and expression patterns of the genes involved in methylmercury degration and mercury reduction in the global deep ocean AG Bravo, I Sanz-Sáez, JM Carreras, O Sánchez, JM Gasol, CM Duarte, ... | | 2019 |