| Machine learning-based integration develops an immune-derived lncRNA signature for improving outcomes in colorectal cancer Z Liu, L Liu, S Weng, C Guo, Q Dang, H Xu, L Wang, T Lu, Y Zhang, Z Sun, ... Nature communications 13 (1), 816, 2022 | 249 | 2022 |
| Characterization of the melanoma miRNAome by deep sequencing MS Stark, S Tyagi, DJ Nancarrow, GM Boyle, AL Cook, DC Whiteman, ... PloS one 5 (3), e9685, 2010 | 235 | 2010 |
| Frequent somatic mutations in MAP3K5 and MAP3K9 in metastatic melanoma identified by exome sequencing MS Stark, SL Woods, MG Gartside, VF Bonazzi, K Dutton-Regester, ... Nature genetics 44 (2), 165-169, 2012 | 218 | 2012 |
| Characterisation of mouse epididymosomes reveals a complex profile of microRNAs and a potential mechanism for modification of the sperm epigenome JN Reilly, EA McLaughlin, SJ Stanger, AL Anderson, K Hutcheon, ... Scientific reports 6 (1), 31794, 2016 | 205 | 2016 |
| The microRNA signature of mouse spermatozoa is substantially modified during epididymal maturation B Nixon, SJ Stanger, BP Mihalas, JN Reilly, AL Anderson, S Tyagi, ... Biology of reproduction 93 (4), 91, 1-20, 2015 | 187 | 2015 |
| Four simple recommendations to encourage best practices in research software RC Jiménez, M Kuzak, M Alhamdoosh, M Barker, B Batut, M Borg, ... F1000Research 6, 2017 | 132 | 2017 |
| CID-miRNA: a web server for prediction of novel miRNA precursors in human genome S Tyagi, C Vaz, V Gupta, R Bhatia, S Maheshwari, A Srinivasan, ... Biochemical and biophysical research communications 372 (4), 831-834, 2008 | 68 | 2008 |
| Next generation sequencing analysis reveals segmental patterns of microRNA expression in mouse epididymal epithelial cells B Nixon, SJ Stanger, BP Mihalas, JN Reilly, AL Anderson, MD Dun, ... PloS one 10 (8), e0135605, 2015 | 53 | 2015 |
| Whole genome expression array profiling highlights differences in mucosal defense genes in Barrett's esophagus and esophageal adenocarcinoma DJ Nancarrow, AD Clouston, BM Smithers, DC Gotley, PA Drew, ... PLoS One 6 (7), e22513, 2011 | 48 | 2011 |
| CEP3 levels affect starvation-related growth responses of the primary root C Delay, K Chapman, M Taleski, Y Wang, S Tyagi, Y Xiong, N Imin, ... Journal of Experimental Botany 70 (18), 4763-4774, 2019 | 45 | 2019 |
| Best practice data life cycle approaches for the life sciences PC Griffin, J Khadake, KS LeMay, SE Lewis, S Orchard, A Pask, B Pope, ... F1000Research 6, 2017 | 44 | 2017 |
| DeepHE: Accurately predicting human essential genes based on deep learning X Zhang, W Xiao, W Xiao PLOS Computational Biology 16 (9), e1008229, 2020 | 42 | 2020 |
| Gene expression alterations in formalin-fixed, paraffin-embedded Barrett esophagus and esophageal adenocarcinoma tissues. NK Botelho, FI Schneiders, SJ Lord, AK Freeman, S Tyagi, DJ Nancarrow, ... Cancer biology & therapy 10 (2), 172-179, 2010 | 33 | 2010 |
| Transcriptome analysis of Capsicum chlorosis virus-induced hypersensitive resistance response in bell Capsicum SMK Widana Gamage, DJ McGrath, DM Persley, RG Dietzgen PLoS One 11 (7), e0159085, 2016 | 29 | 2016 |
| Transcriptome-wide responses of adult melon thrips (Thrips palmi) associated with capsicum chlorosis virus infection SMK Widana Gamage, D Rotenberg, DJ Schneweis, CW Tsai, ... PloS one 13 (12), e0208538, 2018 | 27 | 2018 |
| The molecular characterisation of mitochondrial DNA deficient oocytes using a pig model TS Tsai, S Tyagi, JC St. John Human Reproduction 33 (5), 942-953, 2018 | 23 | 2018 |
| The intercellular tight junction and spontaneous coronary artery dissection JK Fahey, SM Williams, S Tyagi, DR Powell, JC Hallab, G Chahal, ... Journal of the American College of Cardiology 72 (14), 1752-1753, 2018 | 22 | 2018 |
| Assessment of microRNA expression in mouse epididymal epithelial cells and spermatozoa by next generation sequencing AL Anderson, SJ Stanger, BP Mihalas, S Tyagi, JE Holt, EA McLaughlin, ... Genomics data 6, 208-211, 2015 | 22 | 2015 |
| Towards a comprehensive pipeline to identify and functionally annotate long noncoding RNA (lncRNA) Y Ramakrishnaiah, L Kuhlmann, S Tyagi Computers in Biology and Medicine 127, 104028, 2020 | 21 | 2020 |
| Navigating the non-coding genome in heart development and Congenital Heart Disease G Chahal, S Tyagi, M Ramialison Differentiation 107, 11-23, 2019 | 20 | 2019 |
Brett NixonThe University of Newcastle, Callaghan, AustraliaAdresse e-mail validée de newcastle.edu.au
