Ashlee Earl
Ashlee Earl
Broad Institute of MIT & Harvard
Geverifieerd e-mailadres voor broadinstitute.org
TitelGeciteerd doorJaar
Structure, function and diversity of the healthy human microbiome
C Huttenhower, D Gevers, R Knight, S Abubucker, JH Badger, ...
nature 486 (7402), 207, 2012
46542012
Chimeric 16S rRNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons
BJ Haas, D Gevers, AM Earl, M Feldgarden, DV Ward, G Giannoukos, ...
Genome research 21 (3), 494-504, 2011
18372011
A framework for human microbiome research
BA Methé, KE Nelson, M Pop, HH Creasy, MG Giglio, C Huttenhower, ...
nature 486 (7402), 215, 2012
12452012
Pilon: an integrated tool for comprehensive microbial variant detection and genome assembly improvement
BJ Walker, T Abeel, T Shea, M Priest, A Abouelliel, S Sakthikumar, ...
PloS one 9 (11), e112963, 2014
12352014
Genomic analysis identifies association of Fusobacterium with colorectal carcinoma
AD Kostic, D Gevers, CS Pedamallu, M Michaud, F Duke, AM Earl, ...
Genome research 22 (2), 292-298, 2012
9942012
A catalog of reference genomes from the human microbiome.
KE Nelson, GM Weinstock, SK Highlander, KC Worley, HH Creasy, ...
Science (New York, NY) 328 (5981), 994-999, 2010
5282010
Ecology and genomics of Bacillus subtilis
AM Earl, R Losick, R Kolter
Trends in microbiology 16 (6), 269-275, 2008
3642008
Extensive diversity of ionizing-radiation-resistant bacteria recovered from Sonoran Desert soil and description of nine new species of the genus Deinococcus obtained from a …
FA Rainey, K Ray, M Ferreira, BZ Gatz, MF Nobre, D Bagaley, BA Rash, ...
Appl. Environ. Microbiol. 71 (9), 5225-5235, 2005
3392005
Relating the metatranscriptome and metagenome of the human gut
EA Franzosa, XC Morgan, N Segata, L Waldron, J Reyes, AM Earl, ...
Proceedings of the National Academy of Sciences 111 (22), E2329-E2338, 2014
3072014
Why is Deinococcus radiodurans so resistant to ionizing radiation?
JR Battista, AM Earl, MJ Park
Trends in microbiology 7 (9), 362-365, 1999
2991999
Individual intestinal symbionts induce a distinct population of RORγ+ regulatory T cells
E Sefik, N Geva-Zatorsky, S Oh, L Konnikova, D Zemmour, AM McGuire, ...
Science 349 (6251), 993-997, 2015
2892015
Analysis of Deinococcus radiodurans's transcriptional response to ionizing radiation and desiccation reveals novel proteins that contribute to extreme radioresistance
M Tanaka, AM Earl, HA Howell, MJ Park, JA Eisen, SN Peterson, ...
Genetics 168 (1), 21-33, 2004
2702004
Evaluation of 16S rDNA-based community profiling for human microbiome research
Jumpstart Consortium Human Microbiome Project Data Generation Working Group
PloS one 7 (6), e39315, 2012
2102012
Emergence of epidemic multidrug-resistant Enterococcus faecium from animal and commensal strains
F Lebreton, W van Schaik, AM McGuire, P Godfrey, A Griggs, V Mazumdar, ...
MBio 4 (4), e00534-13, 2013
1902013
The IrrE protein of Deinococcus radiodurans R1 is a novel regulator of recA expression
AM Earl, MM Mohundro, IS Mian, JR Battista
Journal of bacteriology 184 (22), 6216-6224, 2002
1832002
Biofilm Development with an Emphasis on Bacillus subtilis
KP Lemon, AM Earl, HC Vlamakis, C Aguilar, R Kolter
Bacterial Biofilms, 1-16, 2008
1812008
Efficient and robust RNA-seq process for cultured bacteria and complex community transcriptomes
G Giannoukos, DM Ciulla, K Huang, BJ Haas, J Izard, JZ Levin, J Livny, ...
Genome biology 13 (3), r23, 2012
1712012
Whole genome characterization of the mechanisms of daptomycin resistance in clinical and laboratory derived isolates of Staphylococcus aureus
AY Peleg, S Miyakis, DV Ward, AM Earl, A Rubio, DR Cameron, S Pillai, ...
PloS one 7 (1), e28316, 2012
1532012
Fap2 mediates Fusobacterium nucleatum colorectal adenocarcinoma enrichment by binding to tumor-expressed Gal-GalNAc
J Abed, JEM Emgård, G Zamir, M Faroja, G Almogy, A Grenov, A Sol, ...
Cell host & microbe 20 (2), 215-225, 2016
1412016
Evolution of extensively drug-resistant tuberculosis over four decades: whole genome sequencing and dating analysis of Mycobacterium tuberculosis isolates from KwaZulu-Natal
KA Cohen, T Abeel, AM McGuire, CA Desjardins, V Munsamy, TP Shea, ...
PLoS medicine 12 (9), e1001880, 2015
1322015
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Artikelen 1–20